Bowburn ConsultancyEnvironment Agency
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Recording images of diatoms

Photomicroscopy

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Drawings of diatoms are difficult to do well and different diatomists have their own drawing ‘styles’, which can make it difficult for others to interpret what they saw. So why didn’t everyone give up drawing as soon as photography became widely available, in the mid- to late-nineteenth century? There are probably three main reasons:

Once film replaced glass and miniature cameras became available, photomicroscopy became practical as a routine means of recording images. The depth-of-focus problem could to some extent be circumvented by making multiple exposures at different levels in the specimen.

The main requirements for successful film-based black-and-white photomicroscopy of diatoms are:

The main requirements for successful film-based colour photomicroscopy of diatoms are:

Colour photography of valves and frustules

There is no point in taking pictures of valves and frustules using colour film (unless you are using the colour interference fringes to create a striking effect: e.g. in Actinocyclus), because they have no intrinsic colour. In many cases, using colour film or digital images to record frustule structure simply reveals the inadequacies of colour correction in the microscope lenses, especially when the condenser position and diaphragm are wrongly set.

Amphipleura: condenser oiled 

This image of a Cocconeis valve was obtained from the Web (and modified to disguise its origin). The original specimen will have been colourless, but fringes of blue, red and magenta are immediately apparent in the photograph. These colours are pure artefact and add nothing of scientific value to the image. Colour images require more bytes of storage and colour film costs more than black-and-white. Why bother when colour is unnecessary?

Filters in black-and-white photography of diatoms

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For cleaned frustules and valves, in order to minimize the effects of chromatic aberration and maximize resolution, it is best to use monochromatic illumination, unless the objectives are of the very highest quality of planapochromats. Many microscopes are most highly corrected for green light (it is very difficult to correct objective lenses for all possible aberrations and all possible wavelengths of light simultaneously). So, it is safest to use a green filter for black-and-white photomicroscopy of cleaned frustules. However, for the highest resolution, blue light would be necessary.

For living diatoms, filters can often make a huge difference to the utility of the image. Diatom chloroplasts absorb blue-green light strongly, because of the presence of high concentrations of xanthophyll pigments, especially fucoxanthin (absorption maximum approximately 500 nm). Hence, using a green or blue-green filter for photomicrographs of living diatoms will make the chloroplasts appear very dark. This is useful if the chloroplasts are thin and delicate, as in some species of high-light environments or if one wants to detect the pyrenoids within the chloroplasts, but it is problematic if the main aim is to examine the nucleus, cytoplasm, golgi apparatus, mitochondria, etc. in living cells. To minimize the contrast between chloroplasts and other cell components, yellow or orange filters should be used.

Living diatoms have yellowish-, greenish- or reddish-brown chloroplasts and different species often have slightly different colours. This variation is obvious to anyone who has studied diatoms from natural habitats, and the differences often persist in culture. For example, Craticula cuspidata chloroplasts are consistently greenish, whereas Navicula menisculus chloroplasts are brown. However, recording these differences is still in its infancy, because of the huge difficulties of maintaining consistent and appropriate colour correction during film-based or digital photography.